Adityarup
Laha

I'm a PhD student in Statistics and Data Science at the National University of Singapore, working on long-read transcriptomics in the Göke Lab at the A*STAR Genome Institute of Singapore.

Adityarup Laha at Bum La Pass
Long reads aligned to a gene, showing four splice isoforms

Current work

Aug 2025 – present

scAICME: Adaptive marker-guided annotation of single-cell and spatial RNA-seq data

A two-stage semi-supervised framework for marker-guided annotation of single-cell RNA-seq data. Canonical marker panels give candidate labels with confidence scores, the high-confidence cells then train an ensemble of supervised classifiers that labels the rest by consensus, and the framework extends to spatial transcriptomics. It is implemented as a Python package built on Scanpy, and a manuscript on it is in preparation.

with Prof. Raghunath Chatterjee (ISI Kolkata), Dr. Jayant Jha (ISI Kolkata)

All research projects →

Open source

PLINK on Arch Linux

Package maintainer, AUR & BioArchLinux

I maintain the PLINK genetics toolkit for Arch Linux, in the AUR and as a member of the BioArchLinux consortium, which involves building against Intel MKL, managing dependencies and keeping up with upstream releases.

Bioconductor

Contributor

I contribute to core Bioconductor infrastructure packages, such as S4Vectors, and to biocthis, which automates package setup for Bioconductor.

r-lib

Contributor

I contribute to styler and lintr, the R code formatter and linter.

More software →

Recent posts